Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | CD58_RS14485 | Not Available | Negative | 3330490 - 3331491 | 36586.5 |
| iron-containing redox enzyme family protein | CD58_RS14490 | Not Available | Negative | 3331501 - 3332886 | 51987.6 |
| cation:proton antiporter | CD58_RS14495 | Not Available | Positive | 3333139 - 3334476 | 47775.1 |
| hypothetical protein | CD58_RS14500 | Not Available | Negative | 3334494 - 3335030 | 20370.5 |
| hypothetical protein | CD58_RS14505 | Not Available | Positive | 3335185 - 3335415 | 8689.82 |
| pas domain-containing sensor histidine kinase | CD58_RS14510 | Not Available | Negative | 3335458 - 3337389 | 70798.0 |
| atp-dependent dna helicase | CD58_RS14515 | Not Available | Negative | 3337441 - 3339738 | 85353.2 |
| vrr-nuc domain-containing protein | CD58_RS14520 | Not Available | Negative | 3339735 - 3341387 | 63223.0 |
| ygdi/ygdr family lipoprotein | CD58_RS14525 | Not Available | Positive | 3341610 - 3341834 | 8063.63 |
| metal abc transporter atp-binding protein | CD58_RS14530 | Not Available | Negative | 3341926 - 3343778 | 65833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
