Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nosr | CD58_RS14435 | Not Available | Negative | 3318735 - 3320867 | 80182.6 |
| maly/patb family protein | CD58_RS14440 | Not Available | Positive | 3321384 - 3322532 | 42036.4 |
| voc family protein | CD58_RS14445 | Not Available | Negative | 3322686 - 3323090 | 14608.2 |
| sdr family oxidoreductase | CD58_RS14450 | Not Available | Positive | 3323275 - 3324132 | 30710.7 |
| duf421 domain-containing protein | CD58_RS14455 | Not Available | Negative | 3324286 - 3324732 | 16359.2 |
| hypothetical protein | CD58_RS14460 | Not Available | Negative | 3324740 - 3325258 | 19141.8 |
| cina family protein | CD58_RS14465 | Not Available | Negative | 3325268 - 3325768 | 18100.6 |
| yip1 family protein | CD58_RS14470 | Not Available | Positive | 3325936 - 3326547 | 22559.1 |
| dna ligase d | CD58_RS14475 | Not Available | Negative | 3326731 - 3329358 | 96407.7 |
| carboxylate-amine ligase | CD58_RS14480 | Not Available | Negative | 3329355 - 3330518 | 43344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
