Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | CD58_RS01010 | Not Available | Positive | 239168 - 239950 | 28078.2 |
| metal abc transporter atp-binding protein | CD58_RS31325 | Not Available | Negative | 240281 - 240403 | 4257.02 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS01015 | Not Available | Positive | 240484 - 241587 | 38631.1 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS01020 | Not Available | Positive | 241584 - 242648 | 38237.4 |
| efflux rnd transporter permease subunit | CD58_RS01025 | Not Available | Positive | 242645 - 245692 | 112233.0 |
| heavy metal translocating p-type atpase | CD58_RS01030 | Not Available | Negative | 245904 - 248123 | 78244.9 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | CD58_RS01035 | Not Available | Positive | 248210 - 248656 | 16775.0 |
| thymidylate synthase | CD58_RS01040 | Not Available | Negative | 248803 - 249774 | 36672.0 |
| prolipoprotein diacylglyceryl transferase | CD58_RS01045 | Not Available | Negative | 249825 - 250634 | 30209.7 |
| metal abc transporter atp-binding protein | CD58_RS01050 | Not Available | Negative | 250703 - 251484 | 26694.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
