Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS28775 | Not Available | Positive | 3282924 - 3283832 | 34025.0 |
| tigr02270 family protein | CD58_RS14290 | Not Available | Positive | 3283870 - 3285156 | 47312.3 |
| dna-binding protein | CD58_RS14295 | Not Available | Negative | 3285206 - 3286186 | 37436.0 |
| site-specific integrase | CD58_RS14300 | Not Available | Positive | 3286275 - 3287405 | 40577.7 |
| laci family dna-binding transcriptional regulator | CD58_RS14305 | Not Available | Positive | 3287516 - 3288535 | 37022.5 |
| abc transporter substrate-binding protein | CD58_RS14310 | Not Available | Positive | 3288519 - 3289523 | 35987.2 |
| abc transporter permease | CD58_RS14315 | Not Available | Positive | 3289584 - 3290393 | 28337.3 |
| abc transporter permease | CD58_RS14320 | Not Available | Positive | 3290390 - 3291184 | 28866.5 |
| abc transporter atp-binding protein | CD58_RS14325 | Not Available | Positive | 3291181 - 3292212 | 37051.0 |
| phosphodiesterase | CD58_RS14330 | Not Available | Positive | 3292237 - 3293067 | 30634.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
