Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | CD58_RS14235 | Not Available | Negative | 3273407 - 3273667 | 9464.19 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | CD58_RS14240 | Not Available | Negative | 3273642 - 3274601 | 35629.1 |
| hypothetical protein | CD58_RS14245 | Not Available | Positive | 3274973 - 3275629 | 24333.8 |
| hypothetical protein | CD58_RS14250 | Not Available | Positive | 3275725 - 3276294 | 21272.7 |
| hypothetical protein | CD58_RS14255 | Not Available | Positive | 3276376 - 3276783 | 15489.4 |
| type vi secretion system vgr family protein | CD58_RS14260 | Not Available | Positive | 3276967 - 3279192 | 83399.9 |
| duf6484 domain-containing protein | CD58_RS14265 | Not Available | Positive | 3279209 - 3279667 | 16001.5 |
| duf2169 domain-containing protein | CD58_RS14270 | Not Available | Positive | 3279682 - 3280794 | 40269.5 |
| hypothetical protein | CD58_RS14275 | Not Available | Positive | 3280791 - 3281831 | 36740.4 |
| paar-like domain-containing protein | CD58_RS14280 | Not Available | Positive | 3281831 - 3282913 | 38785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
