Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase family protein | CD58_RS14185 | Not Available | Negative | 3261359 - 3262042 | 25322.6 |
| sensor histidine kinase | CD58_RS14190 | Not Available | Negative | 3261987 - 3263312 | 49948.3 |
| sigma-54-dependent transcriptional regulator | CD58_RS14195 | Not Available | Negative | 3263305 - 3264717 | 53010.2 |
| abc transporter permease | CD58_RS14200 | Not Available | Negative | 3264746 - 3267175 | 89589.4 |
| abc transporter atp-binding protein | CD58_RS14205 | Not Available | Negative | 3267177 - 3267950 | 27867.1 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS14210 | Not Available | Negative | 3267940 - 3269190 | 46089.0 |
| helix-turn-helix domain-containing protein | CD58_RS14215 | Not Available | Positive | 3269619 - 3270164 | 21204.6 |
| alpha/beta fold hydrolase | CD58_RS14220 | Not Available | Negative | 3270376 - 3271431 | 40093.9 |
| mate family efflux transporter | CD58_RS14225 | Not Available | Negative | 3271421 - 3272773 | 49216.8 |
| hypothetical protein | CD58_RS14230 | Not Available | Negative | 3272770 - 3273414 | 23694.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
