Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oprd family porin | CD58_RS14085 | Not Available | Positive | 3241030 - 3242271 | 45393.2 |
| hypothetical protein | CD58_RS14090 | Not Available | Positive | 3243019 - 3243324 | 11057.0 |
| type iii plp-dependent enzyme | CD58_RS14095 | Not Available | Positive | 3243305 - 3244615 | 47374.2 |
| hypothetical protein | CD58_RS14100 | Not Available | Positive | 3244626 - 3245534 | 32918.5 |
| 3-oxoacyl-acp synthase | CD58_RS14105 | Not Available | Positive | 3245537 - 3246514 | 36080.1 |
| class i adenylate-forming enzyme family protein | CD58_RS14110 | Not Available | Positive | 3246526 - 3248121 | 58467.9 |
| phosphopantetheine-binding protein | CD58_RS14115 | Not Available | Positive | 3248099 - 3248353 | 9533.36 |
| amp-binding protein | CD58_RS14120 | Not Available | Positive | 3248354 - 3249907 | 57437.0 |
| amp-binding protein | CD58_RS14125 | Not Available | Positive | 3249876 - 3251393 | 56187.6 |
| voc family protein | CD58_RS14130 | Not Available | Positive | 3251516 - 3251920 | 14939.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
