Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpp family protein | CD58_RS14035 | Not Available | Negative | 3231098 - 3231805 | 24871.6 |
| udp-glucose dehydrogenase family protein | CD58_RS14040 | Not Available | Negative | 3231980 - 3233359 | 50737.9 |
| metal-dependent hydrolase | CD58_RS14045 | Not Available | Negative | 3233453 - 3234205 | 28484.3 |
| fatty acid desaturase family protein | CD58_RS14050 | Not Available | Negative | 3234209 - 3235084 | 33012.2 |
| hypothetical protein | CD58_RS14055 | Not Available | Negative | 3235087 - 3235848 | 28585.8 |
| lysr family transcriptional regulator | CD58_RS14060 | Not Available | Negative | 3235953 - 3236873 | 34084.4 |
| hypothetical protein | CD58_RS14065 | Not Available | Negative | 3236951 - 3237487 | 19752.4 |
| putative hydro-lyase | CD58_RS14070 | Not Available | Negative | 3237528 - 3238331 | 29482.5 |
| lysr family transcriptional regulator | CD58_RS14075 | Not Available | Negative | 3238422 - 3239369 | 34792.5 |
| mfs transporter | CD58_RS14080 | Not Available | Positive | 3239624 - 3240907 | 46191.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
