Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | CD58_RS13985 | Not Available | Positive | 3219487 - 3220230 | 27635.1 |
| lipid-a-disaccharide synthase n-terminal domain-containing protein | CD58_RS13990 | Not Available | Positive | 3220232 - 3220525 | 11179.6 |
| arnt family glycosyltransferase | CD58_RS13995 | Not Available | Positive | 3220527 - 3222050 | 57402.1 |
| amp-binding protein | CD58_RS14000 | Not Available | Positive | 3222347 - 3224011 | 60053.3 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS14005 | Not Available | Positive | 3224028 - 3224789 | 25732.4 |
| acetyl-coa c-acyltransferase | CD58_RS14010 | Not Available | Positive | 3224800 - 3225987 | 40836.6 |
| acyl-coa dehydrogenase | CD58_RS14015 | Not Available | Positive | 3225997 - 3227124 | 40757.8 |
| enoyl-coa hydratase | CD58_RS14020 | Not Available | Positive | 3227138 - 3227911 | 27743.7 |
| acyl-coa dehydrogenase family protein | CD58_RS14025 | Not Available | Negative | 3228702 - 3229853 | 41504.8 |
| enoyl-coa hydratase/isomerase family protein | CD58_RS14030 | Not Available | Negative | 3229857 - 3230963 | 40865.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
