Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpch/hpai aldolase family protein | CD58_RS13935 | Not Available | Positive | 3209981 - 3210754 | 27641.5 |
| iuca/iucc family protein | CD58_RS13940 | Not Available | Positive | 3210785 - 3212632 | 69919.0 |
| iuca/iucc family c-terminal-domain containing protein | CD58_RS13945 | Not Available | Positive | 3212638 - 3213459 | 30596.0 |
| rraa family protein | CD58_RS13950 | Not Available | Positive | 3213456 - 3214079 | 22174.1 |
| hypothetical protein | CD58_RS13955 | Not Available | Negative | 3214083 - 3214418 | 13097.0 |
| duf1348 family protein | CD58_RS13960 | Not Available | Negative | 3214738 - 3215217 | 18990.0 |
| tetr/acrr family transcriptional regulator | CD58_RS13965 | Not Available | Negative | 3215274 - 3215843 | 20990.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CD58_RS13970 | Not Available | Positive | 3215965 - 3217308 | 50822.5 |
| arac family transcriptional regulator | CD58_RS13975 | Not Available | Positive | 3217320 - 3218336 | 38294.2 |
| nad-dependent epimerase | CD58_RS13980 | Not Available | Positive | 3218487 - 3219458 | 36002.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
