Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CD58_RS13885 | Not Available | Negative | 3195829 - 3197013 | 42795.3 |
| sgcj/ecac family oxidoreductase | CD58_RS13890 | Not Available | Positive | 3197188 - 3197709 | 19293.9 |
| sigma-70 family rna polymerase sigma factor | CD58_RS13895 | Not Available | Positive | 3197894 - 3198403 | 19639.4 |
| fecr domain-containing protein | CD58_RS13900 | Not Available | Positive | 3198403 - 3199347 | 34603.8 |
| tonb-dependent receptor | CD58_RS13905 | Not Available | Positive | 3199415 - 3201847 | 87703.5 |
| diaminobutyrate--2-oxoglutarate transaminase | CD58_RS13910 | Not Available | Positive | 3202167 - 3203543 | 49648.1 |
| iuca/iucc family protein | CD58_RS13915 | Not Available | Positive | 3203714 - 3205498 | 66835.8 |
| type iii plp-dependent enzyme | CD58_RS13920 | Not Available | Positive | 3205491 - 3206702 | 44318.2 |
| dha2 family efflux mfs transporter permease subunit | CD58_RS13925 | Not Available | Positive | 3206699 - 3208105 | 49490.7 |
| iuca/iucc family protein | CD58_RS13930 | Not Available | Positive | 3208122 - 3209987 | 70148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
