Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CD58_RS13835 | Not Available | Positive | 3183791 - 3186313 | 93159.2 |
| phytase | CD58_RS13840 | Not Available | Positive | 3186506 - 3188431 | 69612.0 |
| protein tolq | CD58_RS13845 | Not Available | Positive | 3188496 - 3189203 | 25423.1 |
| protein tolr | CD58_RS13850 | Not Available | Positive | 3189217 - 3189663 | 16166.6 |
| energy transducer tonb | CD58_RS13855 | Not Available | Positive | 3189660 - 3190472 | 29683.7 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS13860 | Not Available | Positive | 3190577 - 3191341 | 26675.0 |
| helix-turn-helix domain-containing protein | CD58_RS13865 | Not Available | Negative | 3191465 - 3192361 | 33443.2 |
| response regulator | CD58_RS13870 | Not Available | Negative | 3192391 - 3192858 | 17838.8 |
| atp-binding protein | CD58_RS13875 | Not Available | Negative | 3192855 - 3195167 | 84578.9 |
| response regulator | CD58_RS13880 | Not Available | Negative | 3195164 - 3195832 | 23552.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
