Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CD58_RS13785 | Not Available | Negative | 3172144 - 3173106 | 35369.3 |
| murein l,d-transpeptidase catalytic domain family protein | CD58_RS13790 | Not Available | Negative | 3173263 - 3173976 | 26172.5 |
| murein l,d-transpeptidase | CD58_RS13795 | Not Available | Positive | 3174106 - 3175668 | 58228.9 |
| nad(p)h-dependent oxidoreductase | CD58_RS13800 | Not Available | Negative | 3175671 - 3176303 | 23181.3 |
| tetr/acrr family transcriptional regulator | CD58_RS13805 | Not Available | Positive | 3176389 - 3177009 | 22363.8 |
| nitrite reductase large subunit nirb | CD58_RS13810 | Not Available | Positive | 3177616 - 3180177 | 92553.7 |
| nitrite reductase small subunit nird | CD58_RS13815 | Not Available | Positive | 3180177 - 3180563 | 14424.2 |
| cbs domain-containing protein | CD58_RS13820 | Not Available | Positive | 3180744 - 3181184 | 16118.7 |
| arac family transcriptional regulator | CD58_RS13825 | Not Available | Negative | 3181346 - 3182383 | 39648.1 |
| ggdef domain-containing protein | CD58_RS13830 | Not Available | Negative | 3182393 - 3183307 | 34179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
