Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | CD58_RS13735 | Not Available | Negative | 3157514 - 3158599 | 40662.2 |
| glcg/hbps family heme-binding protein | CD58_RS13740 | Not Available | Positive | 3158824 - 3159237 | 14510.5 |
| arac family transcriptional regulator | CD58_RS13745 | Not Available | Positive | 3159428 - 3160264 | 31541.3 |
| lyse family translocator | CD58_RS13750 | Not Available | Positive | 3160318 - 3160920 | 21135.4 |
| aldehyde dehydrogenase | CD58_RS13755 | Not Available | Negative | 3161100 - 3162533 | 51321.2 |
| aldolase/citrate lyase family protein | CD58_RS13760 | Not Available | Negative | 3162545 - 3163345 | 28203.7 |
| l-rhamnonate dehydratase | CD58_RS13765 | Not Available | Negative | 3163357 - 3164541 | 43736.7 |
| mfs transporter | CD58_RS13770 | Not Available | Negative | 3164558 - 3165853 | 46123.9 |
| lysr family transcriptional regulator | CD58_RS13775 | Not Available | Positive | 3165980 - 3166924 | 34970.9 |
| dermonecrotic toxin domain-containing protein | CD58_RS13780 | Not Available | Positive | 3167054 - 3172150 | 190300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
