Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-iditol 2-dehydrogenase | CD58_RS13685 | Not Available | Negative | 3145438 - 3146211 | 27215.6 |
| arac family transcriptional regulator | CD58_RS13690 | Not Available | Positive | 3146504 - 3147406 | 33990.9 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | CD58_RS13695 | Not Available | Negative | 3147419 - 3148630 | 41446.0 |
| oprd family porin | CD58_RS13700 | Not Available | Positive | 3148944 - 3150251 | 47665.4 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS13705 | Not Available | Negative | 3150414 - 3150902 | 17669.5 |
| p-hydroxycinnamoyl coa hydratase/lyase | CD58_RS13710 | Not Available | Positive | 3151118 - 3151948 | 31051.3 |
| aldehyde dehydrogenase | CD58_RS13715 | Not Available | Positive | 3152057 - 3153505 | 50348.6 |
| feruloyl-coa synthase | CD58_RS13720 | Not Available | Positive | 3153648 - 3155525 | 68175.6 |
| gntr family transcriptional regulator | CD58_RS13725 | Not Available | Positive | 3155732 - 3156445 | 26290.5 |
| pdr/vanb family oxidoreductase | CD58_RS13730 | Not Available | Negative | 3156567 - 3157517 | 34990.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
