Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein relay system zinc metallohydrolase 1 | CD58_RS13640 | Not Available | Positive | 3132816 - 3133751 | 34017.0 |
| pqq-dependent methanol/ethanol family dehydrogenase | CD58_RS13645 | Not Available | Positive | 3134040 - 3135815 | 64469.5 |
| aldehyde dehydrogenase family protein | CD58_RS13650 | Not Available | Positive | 3136121 - 3137641 | 54908.9 |
| pyrroloquinoline quinone precursor peptide pqqa | CD58_RS29260 | Not Available | Positive | 3137918 - 3137989 | 2795.41 |
| alcohol dehydrogenase-like regulatory protein erca | CD58_RS13655 | Not Available | Positive | 3138123 - 3139280 | 41263.1 |
| hybrid sensor histidine kinase/response regulator | CD58_RS13660 | Not Available | Positive | 3139264 - 3140634 | 50090.5 |
| metal abc transporter atp-binding protein | CD58_RS13665 | Not Available | Positive | 3141038 - 3142683 | 60773.5 |
| rrf2 family transcriptional regulator | CD58_RS13670 | Not Available | Negative | 3142796 - 3143260 | 16914.4 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS13675 | Not Available | Positive | 3143406 - 3144299 | 31742.8 |
| cap domain-containing protein | CD58_RS13680 | Not Available | Negative | 3144392 - 3145243 | 30362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
