Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CD58_RS13585 | Not Available | Negative | 3122231 - 3122962 | 26593.0 |
| yvtn family beta-propeller repeat protein | CD58_RS13590 | Not Available | Negative | 3122959 - 3123966 | 36481.0 |
| abc transporter substrate-binding protein | CD58_RS13595 | Not Available | Negative | 3123993 - 3125177 | 43571.9 |
| atp-binding protein | CD58_RS13605 | Not Available | Positive | 3125605 - 3126864 | 46290.4 |
| response regulator transcription factor | CD58_RS13610 | Not Available | Positive | 3126861 - 3127499 | 23317.6 |
| pentapeptide repeat-containing protein | CD58_RS13615 | Not Available | Negative | 3127670 - 3128314 | 23309.5 |
| quinoprotein ethanol dehydrogenase | CD58_RS13620 | Not Available | Negative | 3128558 - 3130435 | 68481.2 |
| cytochrome c-550 pedf | CD58_RS13625 | Not Available | Positive | 3130687 - 3131148 | 16477.4 |
| substrate-binding periplasmic protein | CD58_RS13630 | Not Available | Positive | 3131154 - 3132029 | 32934.1 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | CD58_RS13635 | Not Available | Positive | 3132040 - 3132798 | 27694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
