Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CD58_RS13535 | Not Available | Negative | 3109884 - 3110318 | 15883.1 |
| lysr substrate-binding domain-containing protein | CD58_RS13540 | Not Available | Negative | 3110465 - 3111361 | 32887.0 |
| mfs transporter | CD58_RS13545 | Not Available | Positive | 3111454 - 3112869 | 50614.3 |
| glucarate dehydratase family protein | CD58_RS13550 | Not Available | Positive | 3112866 - 3114140 | 46787.0 |
| porin | CD58_RS13555 | Not Available | Positive | 3114504 - 3115688 | 42734.6 |
| nitric oxide-sensing protein nosp | CD58_RS13560 | Not Available | Positive | 3116017 - 3117180 | 42380.6 |
| hybrid sensor histidine kinase/response regulator nahk/ercs' | CD58_RS13565 | Not Available | Positive | 3117110 - 3119752 | 99219.0 |
| response regulator transcription factor | CD58_RS13570 | Not Available | Negative | 3119942 - 3120607 | 24548.8 |
| pqq-dependent catabolism-associated cxxcw motif protein | CD58_RS13575 | Not Available | Negative | 3120663 - 3121196 | 19866.7 |
| abc transporter permease | CD58_RS13580 | Not Available | Negative | 3121443 - 3122234 | 29451.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
