Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | CD58_RS13485 | Not Available | Negative | 3098570 - 3099826 | 44655.8 |
| 2fe-2s iron-sulfur cluster-binding protein | CD58_RS13490 | Not Available | Negative | 3099823 - 3100059 | 8185.93 |
| metal abc transporter atp-binding protein | CD58_RS13495 | Not Available | Negative | 3100052 - 3101166 | 40323.6 |
| 4-hydroxyproline epimerase | CD58_RS13500 | Not Available | Negative | 3101163 - 3102095 | 33264.4 |
| gntr family transcriptional regulator | CD58_RS13505 | Not Available | Negative | 3102204 - 3102875 | 25524.8 |
| mfs transporter | CD58_RS13510 | Not Available | Negative | 3103118 - 3104284 | 40046.9 |
| plp-dependent aminotransferase family protein | CD58_RS13515 | Not Available | Positive | 3104427 - 3105824 | 51682.2 |
| tonb-dependent siderophore receptor | CD58_RS13520 | Not Available | Positive | 3106117 - 3108246 | 77964.7 |
| tautomerase family protein | CD58_RS13525 | Not Available | Negative | 3108445 - 3108651 | 7815.28 |
| lysr family transcriptional regulator | CD58_RS13530 | Not Available | Positive | 3108780 - 3109703 | 34441.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
