Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-butanediol dehydrogenase | CD58_RS13435 | Not Available | Positive | 3088568 - 3089632 | 37397.4 |
| dinb family protein | CD58_RS13440 | Not Available | Negative | 3089698 - 3090252 | 21577.4 |
| dihydrodipicolinate synthase family protein | CD58_RS13445 | Not Available | Negative | 3090404 - 3091321 | 33217.1 |
| trans-3-hydroxy-l-proline dehydratase | CD58_RS13450 | Not Available | Negative | 3091490 - 3092518 | 36691.1 |
| amino acid abc transporter atp-binding protein | CD58_RS13455 | Not Available | Negative | 3092673 - 3093395 | 26103.9 |
| amino acid abc transporter permease | CD58_RS13460 | Not Available | Negative | 3093388 - 3094038 | 23862.2 |
| amino acid abc transporter permease | CD58_RS13465 | Not Available | Negative | 3094063 - 3094728 | 24832.0 |
| aconitase x | CD58_RS13470 | Not Available | Negative | 3094721 - 3096499 | 62596.1 |
| transporter substrate-binding domain-containing protein | CD58_RS13475 | Not Available | Negative | 3096510 - 3097328 | 29517.3 |
| arac family transcriptional regulator | CD58_RS13480 | Not Available | Negative | 3097560 - 3098309 | 28092.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
