Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CD58_RS00915 | Not Available | Positive | 210637 - 213072 | 90244.9 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS00920 | Not Available | Positive | 213542 - 214321 | 27822.1 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS00925 | Not Available | Positive | 214318 - 215637 | 47897.7 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS00930 | Not Available | Positive | 215639 - 217735 | 77994.2 |
| gnat family n-acetyltransferase | CD58_RS00935 | Not Available | Positive | 217745 - 218236 | 18048.5 |
| duf6916 family protein | CD58_RS00940 | Not Available | Negative | 218386 - 218697 | 11706.1 |
| phage tail protein | CD58_RS00945 | Not Available | Negative | 218746 - 219333 | 19863.6 |
| sulfotransferase family protein | CD58_RS00950 | Not Available | Positive | 219639 - 220484 | 31783.8 |
| ig-like domain-containing protein | CD58_RS00955 | Not Available | Positive | 220537 - 226857 | 207848.0 |
| tolc family protein | CD58_RS00960 | Not Available | Positive | 226898 - 228409 | 55612.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
