Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CD58_RS13385 | Not Available | Negative | 3077621 - 3078934 | 47781.7 |
| response regulator | CD58_RS13390 | Not Available | Negative | 3078931 - 3079671 | 27868.0 |
| duf2790 domain-containing protein | CD58_RS13395 | Not Available | Positive | 3079905 - 3080168 | 9415.11 |
| cytochrome c biogenesis protein dipz | CD58_RS13400 | Not Available | Positive | 3080243 - 3081454 | 43077.9 |
| hypothetical protein | CD58_RS13405 | Not Available | Positive | 3081685 - 3082014 | 12293.1 |
| sigma-54-dependent fis family transcriptional regulator | CD58_RS13410 | Not Available | Negative | 3082024 - 3083886 | 68720.2 |
| atp-nad kinase family protein | CD58_RS13415 | Not Available | Positive | 3084243 - 3085325 | 38015.9 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | CD58_RS13420 | Not Available | Positive | 3085328 - 3086305 | 34771.1 |
| alpha-ketoacid dehydrogenase subunit beta | CD58_RS13425 | Not Available | Positive | 3086355 - 3087371 | 36382.9 |
| acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | CD58_RS13430 | Not Available | Positive | 3087371 - 3088483 | 39891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
