Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | CD58_RS13335 | Not Available | Positive | 3067200 - 3068219 | 37044.6 |
| transporter substrate-binding domain-containing protein | CD58_RS13340 | Not Available | Negative | 3068385 - 3069176 | 29412.3 |
| tetr family transcriptional regulator | CD58_RS13345 | Not Available | Negative | 3069264 - 3069917 | 23957.6 |
| arabinose transporter | CD58_RS13350 | Not Available | Positive | 3070068 - 3071309 | 42392.4 |
| sdr family oxidoreductase | CD58_RS13355 | Not Available | Positive | 3071372 - 3072238 | 30416.2 |
| voc family protein | CD58_RS13360 | Not Available | Positive | 3072287 - 3072712 | 15736.7 |
| response regulator | CD58_RS13365 | Not Available | Negative | 3072779 - 3073411 | 23278.3 |
| cache domain-containing protein | CD58_RS13370 | Not Available | Negative | 3073443 - 3074804 | 50056.4 |
| carbon starvation csta family protein | CD58_RS13375 | Not Available | Positive | 3075106 - 3077166 | 73624.1 |
| ybdd/yjix family protein | CD58_RS13380 | Not Available | Positive | 3077182 - 3077379 | 7563.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
