Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | CD58_RS13285 | Not Available | Negative | 3052959 - 3053636 | 24303.2 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | CD58_RS13290 | Not Available | Positive | 3053823 - 3054728 | 34690.5 |
| homoprotocatechuate degradation operon regulator hpar | CD58_RS13295 | Not Available | Positive | 3054869 - 3055291 | 16228.7 |
| hypothetical protein | CD58_RS13300 | Not Available | Negative | 3055292 - 3056074 | 28522.0 |
| bacteriophage n4 adsorption protein a | CD58_RS13305 | Not Available | Negative | 3056255 - 3058801 | 92262.0 |
| glycosyl transferase family protein | CD58_RS13310 | Not Available | Negative | 3058798 - 3060912 | 80761.7 |
| metal abc transporter atp-binding protein | CD58_RS13315 | Not Available | Negative | 3060925 - 3063121 | 77371.4 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | CD58_RS13320 | Not Available | Negative | 3063158 - 3064390 | 45141.6 |
| trap transporter small permease | CD58_RS13325 | Not Available | Positive | 3065318 - 3065866 | 20155.6 |
| trap transporter large permease subunit | CD58_RS13330 | Not Available | Positive | 3065863 - 3067143 | 44981.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
