Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | CD58_RS13135 | Not Available | Negative | 3020238 - 3021068 | 30850.5 |
| carbohydrate abc transporter permease | CD58_RS13140 | Not Available | Negative | 3021079 - 3022011 | 33879.4 |
| abc transporter substrate-binding protein | CD58_RS13145 | Not Available | Negative | 3022162 - 3023472 | 47814.8 |
| arac family transcriptional regulator | CD58_RS13150 | Not Available | Negative | 3023797 - 3024702 | 34652.4 |
| glycosyltransferase | CD58_RS13155 | Not Available | Negative | 3024793 - 3026085 | 48517.3 |
| response regulator | CD58_RS13160 | Not Available | Negative | 3026163 - 3026534 | 13417.4 |
| response regulator | CD58_RS13165 | Not Available | Positive | 3026790 - 3030272 | 129236.0 |
| cher family methyltransferase | CD58_RS13170 | Not Available | Positive | 3030272 - 3031087 | 31439.8 |
| chemotaxis protein cheb | CD58_RS13175 | Not Available | Positive | 3031084 - 3031662 | 20426.6 |
| hybrid sensor histidine kinase/response regulator | CD58_RS13180 | Not Available | Positive | 3031668 - 3032948 | 47918.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
