Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | CD58_RS13035 | Not Available | Positive | 2997271 - 2998101 | 30330.6 |
| duf1294 domain-containing protein | CD58_RS13040 | Not Available | Positive | 2998098 - 2998526 | 15913.7 |
| mmcq/yjbr family dna-binding protein | CD58_RS13045 | Not Available | Negative | 2998533 - 2998883 | 12974.0 |
| lysr substrate-binding domain-containing protein | CD58_RS13050 | Not Available | Negative | 2998880 - 2999788 | 33759.3 |
| fmn-dependent nadh-azoreductase | CD58_RS13055 | Not Available | Positive | 2999918 - 3000526 | 21494.5 |
| alpha/beta hydrolase family protein | CD58_RS13060 | Not Available | Positive | 3000707 - 3001744 | 36781.0 |
| is481 family transposase | CD58_RS13065 | Not Available | Negative | 3001904 - 3003028 | 43205.3 |
| mfs transporter | CD58_RS13070 | Not Available | Negative | 3003950 - 3005143 | 41105.6 |
| abc-f family atpase | CD58_RS13075 | Not Available | Negative | 3005387 - 3006976 | 59061.6 |
| lipid a hydroxylase lpxo | CD58_RS13080 | Not Available | Positive | 3007384 - 3008283 | 34305.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
