Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | CD58_RS12985 | Not Available | Positive | 2987306 - 2988631 | 49632.7 |
| transporter | CD58_RS12990 | Not Available | Negative | 2988775 - 2990058 | 46250.2 |
| hypothetical protein | CD58_RS12995 | Not Available | Negative | 2990105 - 2990851 | 25374.9 |
| c39 family peptidase | CD58_RS13000 | Not Available | Negative | 2990914 - 2991594 | 25459.2 |
| hypothetical protein | CD58_RS13005 | Not Available | Negative | 2991661 - 2992644 | 32759.2 |
| hypothetical protein | CD58_RS13010 | Not Available | Negative | 2992707 - 2993285 | 19495.7 |
| hypothetical protein | CD58_RS13015 | Not Available | Negative | 2993287 - 2993733 | 14784.4 |
| aaa family atpase | CD58_RS13020 | Not Available | Negative | 2994060 - 2994584 | 19938.8 |
| nicotinamide riboside transporter pnuc | CD58_RS13025 | Not Available | Negative | 2994581 - 2995144 | 21083.1 |
| methyl-accepting chemotaxis protein | CD58_RS13030 | Not Available | Negative | 2995364 - 2996998 | 58701.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
