Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zape | CD58_RS12940 | Not Available | Positive | 2975334 - 2976455 | 42882.3 |
| gnat family n-acetyltransferase | CD58_RS12945 | Not Available | Positive | 2976520 - 2977014 | 17811.7 |
| phosphoethanolamine transferase cpta | CD58_RS12950 | Not Available | Negative | 2977546 - 2979285 | 65900.9 |
| duf6026 family protein | CD58_RS31220 | Not Available | Negative | 2979708 - 2979881 | 6732.36 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | CD58_RS12955 | Not Available | Positive | 2980132 - 2981136 | 36218.2 |
| glucose-6-phosphate dehydrogenase | CD58_RS12960 | Not Available | Positive | 2981133 - 2982653 | 56177.7 |
| cof-type had-iib family hydrolase | CD58_RS12965 | Not Available | Positive | 2982650 - 2983471 | 29423.4 |
| sodium/proton antiporter nhab | CD58_RS12970 | Not Available | Negative | 2983626 - 2985128 | 54871.3 |
| hypothetical protein | CD58_RS12975 | Not Available | Negative | 2985223 - 2986512 | 45865.5 |
| hypothetical protein | CD58_RS12980 | Not Available | Negative | 2986700 - 2986966 | 9797.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
