Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | CD58_RS00865 | Not Available | Positive | 188176 - 188502 | 11516.5 |
| hypothetical protein | CD58_RS00870 | Not Available | Negative | 188797 - 189135 | 12456.9 |
| metal abc transporter atp-binding protein | CD58_RS00875 | Not Available | Negative | 189320 - 200860 | 381138.0 |
| tolc family outer membrane protein | CD58_RS00880 | Not Available | Positive | 201185 - 202534 | 49546.2 |
| type i secretion system permease/atpase | CD58_RS00885 | Not Available | Positive | 202574 - 204730 | 78686.0 |
| hlyd family type i secretion periplasmic adaptor subunit | CD58_RS00890 | Not Available | Positive | 204720 - 206087 | 50365.9 |
| duf6124 family protein | CD58_RS00895 | Not Available | Negative | 206415 - 206618 | 7010.38 |
| metal abc transporter atp-binding protein | CD58_RS00900 | Not Available | Negative | 207883 - 208086 | 7032.33 |
| hypothetical protein | CD58_RS00905 | Not Available | Positive | 208704 - 209192 | 18064.2 |
| tigr01777 family oxidoreductase | CD58_RS00910 | Not Available | Positive | 209185 - 210627 | 52380.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
