Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | CD58_RS12890 | Not Available | Negative | 2963234 - 2964238 | 37013.6 |
| dermonecrotic toxin domain-containing protein | CD58_RS12895 | Not Available | Negative | 2964418 - 2969253 | 178666.0 |
| ldh family oxidoreductase | CD58_RS12900 | Not Available | Positive | 2969482 - 2970513 | 35926.0 |
| yqjd family protein | CD58_RS12905 | Not Available | Negative | 2970629 - 2970946 | 11422.7 |
| hypothetical protein | CD58_RS12910 | Not Available | Positive | 2971107 - 2971361 | 9641.47 |
| lysr family transcriptional regulator | CD58_RS12915 | Not Available | Negative | 2971365 - 2972273 | 32521.5 |
| carbon-nitrogen hydrolase family protein | CD58_RS12920 | Not Available | Positive | 2972360 - 2973283 | 32897.7 |
| lea type 2 family protein | CD58_RS12925 | Not Available | Negative | 2973284 - 2973754 | 16884.6 |
| helix-turn-helix transcriptional regulator | CD58_RS12930 | Not Available | Positive | 2974012 - 2974728 | 26487.1 |
| nuclear transport factor 2 family protein | CD58_RS12935 | Not Available | Positive | 2974780 - 2975121 | 12490.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
