Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CD58_RS12840 | Not Available | Negative | 2950089 - 2952083 | 71878.8 |
| gnat family n-acetyltransferase | CD58_RS12845 | Not Available | Negative | 2952281 - 2953225 | 34622.9 |
| phenylacetate--coa ligase family protein | CD58_RS12850 | Not Available | Negative | 2953222 - 2954496 | 46756.7 |
| acyl-coa reductase | CD58_RS12855 | Not Available | Negative | 2954552 - 2956963 | 87829.5 |
| acyl-protein synthase | CD58_RS12860 | Not Available | Negative | 2956965 - 2958092 | 41598.4 |
| mdfa family multidrug efflux mfs transporter | CD58_RS12865 | Not Available | Negative | 2958122 - 2959357 | 43356.9 |
| hypothetical protein | CD58_RS31215 | Not Available | Negative | 2959683 - 2959820 | 5244.45 |
| hypothetical protein | CD58_RS12875 | Not Available | Positive | 2959971 - 2960159 | 6989.07 |
| fe2+ zn2+ uptake regulation protein | CD58_RS12880 | Not Available | Negative | 2960169 - 2960549 | 13667.6 |
| acylase | CD58_RS12885 | Not Available | Positive | 2960837 - 2963185 | 85582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
