Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | CD58_RS12790 | Not Available | Negative | 2934064 - 2936223 | 81480.7 |
| duf2934 domain-containing protein | CD58_RS12795 | Not Available | Negative | 2936483 - 2936827 | 11943.2 |
| malto-oligosyltrehalose synthase | CD58_RS12800 | Not Available | Negative | 2936848 - 2939631 | 104558.0 |
| metal abc transporter atp-binding protein | CD58_RS12805 | Not Available | Negative | 2939628 - 2941705 | 73909.0 |
| malto-oligosyltrehalose trehalohydrolase | CD58_RS12810 | Not Available | Negative | 2941702 - 2943504 | 67427.2 |
| glycogen synthase glga | CD58_RS12815 | Not Available | Negative | 2943512 - 2945083 | 56560.9 |
| d-2-hydroxyacid dehydrogenase family protein | CD58_RS12820 | Not Available | Negative | 2946951 - 2947922 | 35322.8 |
| alpha/beta fold hydrolase | CD58_RS12825 | Not Available | Negative | 2947934 - 2948965 | 38126.8 |
| yqaa family protein | CD58_RS12830 | Not Available | Negative | 2949052 - 2949486 | 16030.1 |
| duf411 domain-containing protein | CD58_RS12835 | Not Available | Negative | 2949486 - 2949932 | 15851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
