Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron transporter | CD58_RS12690 | Not Available | Negative | 2910268 - 2910798 | 19103.9 |
| duf3079 domain-containing protein | CD58_RS12695 | Not Available | Positive | 2911000 - 2911227 | 8348.91 |
| dipeptidase | CD58_RS12700 | Not Available | Negative | 2911437 - 2913176 | 63002.0 |
| peptidase u32 family protein | CD58_RS12705 | Not Available | Negative | 2913480 - 2915480 | 74147.4 |
| sensor domain-containing diguanylate cyclase | CD58_RS12710 | Not Available | Negative | 2915599 - 2917167 | 57535.3 |
| metallophosphoesterase family protein | CD58_RS12715 | Not Available | Positive | 2917279 - 2917743 | 16599.1 |
| alkene reductase | CD58_RS12720 | Not Available | Negative | 2917865 - 2918953 | 39155.5 |
| pirin family protein | CD58_RS12725 | Not Available | Negative | 2918999 - 2919838 | 29698.3 |
| lysr family transcriptional regulator | CD58_RS12730 | Not Available | Positive | 2919963 - 2920877 | 33145.0 |
| flavin-containing monooxygenase | CD58_RS12735 | Not Available | Positive | 2921162 - 2922487 | 48326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
