Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase molybdenum cofactor assembly chaperone | CD58_RS12640 | Not Available | Positive | 2900854 - 2901609 | 27861.1 |
| respiratory nitrate reductase subunit gamma | CD58_RS12645 | Not Available | Positive | 2901602 - 2902282 | 24931.4 |
| peptidylprolyl isomerase | CD58_RS12650 | Not Available | Positive | 2902293 - 2903261 | 34353.7 |
| gtp 3',8-cyclase moaa | CD58_RS12655 | Not Available | Positive | 2903287 - 2904279 | 36796.9 |
| ribonucleoside triphosphate reductase | CD58_RS12660 | Not Available | Positive | 2904589 - 2906604 | 75733.1 |
| anaerobic ribonucleoside-triphosphate reductase | CD58_RS31610 | Not Available | Positive | 2906636 - 2906797 | 6092.16 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | CD58_RS12670 | Not Available | Positive | 2906794 - 2907489 | 25839.3 |
| 4fe-4s binding protein | CD58_RS12675 | Not Available | Negative | 2907671 - 2909038 | 50504.5 |
| ftr1 family protein | CD58_RS12680 | Not Available | Negative | 2909026 - 2909880 | 30495.7 |
| cupredoxin domain-containing protein | CD58_RS12685 | Not Available | Negative | 2909903 - 2910265 | 13473.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
