Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | CD58_RS12590 | Not Available | Positive | 2887218 - 2888108 | 32337.9 |
| scp2 domain-containing protein | CD58_RS12595 | Not Available | Positive | 2888102 - 2888572 | 17738.9 |
| putative zinc-binding protein | CD58_RS12600 | Not Available | Positive | 2888572 - 2888946 | 13269.2 |
| crp/fnr family transcriptional regulator | CD58_RS12605 | Not Available | Negative | 2889113 - 2889790 | 25494.2 |
| two-component system response regulator narl | CD58_RS12610 | Not Available | Negative | 2890047 - 2890694 | 24075.6 |
| hamp domain-containing protein | CD58_RS12615 | Not Available | Negative | 2890691 - 2892490 | 67315.0 |
| mfs transporter | CD58_RS12620 | Not Available | Positive | 2892797 - 2894098 | 47262.7 |
| nark family nitrate/nitrite mfs transporter | CD58_RS12625 | Not Available | Positive | 2894076 - 2895473 | 50541.4 |
| nitrate reductase subunit alpha | CD58_RS12630 | Not Available | Positive | 2895538 - 2899311 | 140668.0 |
| nitrate reductase subunit beta | CD58_RS12635 | Not Available | Positive | 2899313 - 2900851 | 57958.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
