Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS12540 | Not Available | Negative | 2877777 - 2877977 | 7581.36 |
| crp/fnr family transcriptional regulator | CD58_RS12545 | Not Available | Negative | 2877974 - 2878657 | 26222.0 |
| nnrs family protein | CD58_RS12550 | Not Available | Positive | 2879240 - 2880430 | 43053.4 |
| membrane protein | CD58_RS12555 | Not Available | Positive | 2880453 - 2880893 | 16408.7 |
| iron-sulfur cluster repair protein ytfe | CD58_RS12560 | Not Available | Negative | 2881029 - 2881706 | 25519.7 |
| nitric oxide reductase transcriptional regulator norr | CD58_RS12565 | Not Available | Positive | 2881869 - 2883401 | 56209.8 |
| pyridoxamine 5'-phosphate oxidase | CD58_RS12570 | Not Available | Positive | 2883608 - 2884255 | 24504.9 |
| molybdenum cofactor biosynthesis protein b | CD58_RS12575 | Not Available | Positive | 2884344 - 2884898 | 19741.8 |
| gephyrin-like molybdotransferase glp | CD58_RS12580 | Not Available | Positive | 2884895 - 2886130 | 44200.7 |
| peptidase u32 family protein | CD58_RS12585 | Not Available | Positive | 2886212 - 2887207 | 36308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
