Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | CD58_RS12490 | Not Available | Negative | 2869228 - 2869557 | 11629.1 |
| c-type cytochrome | CD58_RS12495 | Not Available | Negative | 2869727 - 2870038 | 10669.2 |
| nitrite reductase | CD58_RS12500 | Not Available | Negative | 2870063 - 2871631 | 57571.7 |
| hypothetical protein | CD58_RS12505 | Not Available | Negative | 2871754 - 2871942 | 6954.49 |
| cbbq/nirq/norq/gpvn family protein | CD58_RS12510 | Not Available | Positive | 2871941 - 2872744 | 29800.9 |
| cytochrome c oxidase subunit 3 family protein | CD58_RS12515 | Not Available | Positive | 2872728 - 2873312 | 21883.1 |
| cytochrome c oxidase subunit iv family protein | CD58_RS12520 | Not Available | Positive | 2873325 - 2873582 | 9027.6 |
| c-type cytochrome | CD58_RS12525 | Not Available | Positive | 2873880 - 2874320 | 16637.8 |
| cbb3-type cytochrome c oxidase subunit i | CD58_RS12530 | Not Available | Positive | 2874324 - 2875751 | 53182.6 |
| nitric oxide reductase activation protein nord | CD58_RS12535 | Not Available | Positive | 2875934 - 2877772 | 70535.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
