Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CD58_RS12440 | Not Available | Negative | 2860229 - 2861662 | 52512.6 |
| carboxymuconolactone decarboxylase family protein | CD58_RS12445 | Not Available | Positive | 2861867 - 2862307 | 16224.4 |
| cytochrome d1 domain-containing protein | CD58_RS12450 | Not Available | Negative | 2862529 - 2864025 | 55141.8 |
| uroporphyrinogen-iii c-methyltransferase | CD58_RS12455 | Not Available | Negative | 2864022 - 2864861 | 29529.9 |
| heme d1 biosynthesis radical sam protein nirj | CD58_RS12460 | Not Available | Negative | 2864911 - 2866107 | 44553.0 |
| lrp/asnc family transcriptional regulator | CD58_RS12465 | Not Available | Negative | 2866136 - 2866672 | 20108.3 |
| lrp/asnc family transcriptional regulator | CD58_RS12470 | Not Available | Negative | 2866647 - 2867090 | 16853.4 |
| lrp/asnc family transcriptional regulator | CD58_RS12475 | Not Available | Negative | 2867083 - 2867595 | 19293.4 |
| lrp/asnc family transcriptional regulator | CD58_RS12480 | Not Available | Negative | 2867592 - 2868050 | 16949.2 |
| cytochrome d1 domain-containing protein | CD58_RS12485 | Not Available | Negative | 2868053 - 2869231 | 42786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
