Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | CD58_RS00815 | Not Available | Negative | 173613 - 174599 | 36597.8 |
| sigma-70 family rna polymerase sigma factor | CD58_RS00820 | Not Available | Negative | 174604 - 175104 | 19117.1 |
| methyl-accepting chemotaxis protein | CD58_RS00825 | Not Available | Positive | 175406 - 177286 | 67042.0 |
| srpbcc family protein | CD58_RS00830 | Not Available | Negative | 177806 - 178270 | 17349.6 |
| non-ribosomal peptide synthetase | CD58_RS00835 | Not Available | Negative | 178303 - 181728 | 125368.0 |
| diiron oxygenase | CD58_RS00840 | Not Available | Negative | 181739 - 182671 | 35011.9 |
| duf3050 domain-containing protein | CD58_RS00845 | Not Available | Negative | 182668 - 183444 | 28984.6 |
| gntr family transcriptional regulator | CD58_RS00850 | Not Available | Negative | 184131 - 184823 | 25819.2 |
| cysteine protease lapg | CD58_RS00855 | Not Available | Positive | 185026 - 185718 | 26118.5 |
| cyclic di-gmp receptor lapd | CD58_RS00860 | Not Available | Positive | 185733 - 187679 | 71602.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
