Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CD58_RS12390 | Not Available | Negative | 2845392 - 2847107 | 62087.7 |
| 2-hydroxyacid dehydrogenase | CD58_RS12395 | Not Available | Negative | 2847540 - 2848517 | 34906.3 |
| mfs transporter | CD58_RS12400 | Not Available | Negative | 2848532 - 2849830 | 47666.0 |
| sugar kinase | CD58_RS12405 | Not Available | Negative | 2849919 - 2850899 | 35217.9 |
| sugar phosphate isomerase/epimerase family protein | CD58_RS12410 | Not Available | Negative | 2850892 - 2851674 | 28257.7 |
| laci family dna-binding transcriptional regulator | CD58_RS12415 | Not Available | Negative | 2851869 - 2852894 | 37380.0 |
| hypothetical protein | CD58_RS12420 | Not Available | Negative | 2853232 - 2853585 | 12688.0 |
| nad-glutamate dehydrogenase | CD58_RS12425 | Not Available | Positive | 2854018 - 2858886 | 182017.0 |
| cupin domain-containing protein | CD58_RS12430 | Not Available | Negative | 2859073 - 2859477 | 14418.7 |
| antibiotic biosynthesis monooxygenase family protein | CD58_RS12435 | Not Available | Negative | 2859812 - 2860105 | 10888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
