Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | CD58_RS12340 | Not Available | Negative | 2831564 - 2832166 | 23399.3 |
| aaa family atpase | CD58_RS12345 | Not Available | Negative | 2832163 - 2835804 | 136776.0 |
| exonuclease sbccd subunit d c-terminal domain-containing protein | CD58_RS12350 | Not Available | Negative | 2835801 - 2837045 | 45927.9 |
| batd family protein | CD58_RS12355 | Not Available | Negative | 2837344 - 2838981 | 59676.7 |
| vwa domain-containing protein | CD58_RS12360 | Not Available | Negative | 2838978 - 2840714 | 64175.1 |
| vwa domain-containing protein | CD58_RS12365 | Not Available | Negative | 2840711 - 2841790 | 40066.8 |
| duf4381 domain-containing protein | CD58_RS12370 | Not Available | Negative | 2841783 - 2842277 | 18433.8 |
| duf58 domain-containing protein | CD58_RS12375 | Not Available | Negative | 2842274 - 2843218 | 35704.1 |
| aaa family atpase | CD58_RS12380 | Not Available | Negative | 2843228 - 2844187 | 35492.0 |
| duf6124 family protein | CD58_RS12385 | Not Available | Positive | 2844753 - 2845121 | 13486.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
