Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS12295 | Not Available | Negative | 2817235 - 2821947 | 176008.0 |
| fadr/gntr family transcriptional regulator | CD58_RS12300 | Not Available | Negative | 2822082 - 2822801 | 26577.0 |
| metal abc transporter atp-binding protein | CD58_RS12305 | Not Available | Negative | 2823107 - 2824842 | 61669.4 |
| mfs transporter | CD58_RS12310 | Not Available | Positive | 2825036 - 2826358 | 48288.4 |
| arad1 family protein | CD58_RS12315 | Not Available | Positive | 2826516 - 2827508 | 35925.5 |
| aldehyde dehydrogenase (nadp(+)) | CD58_RS12320 | Not Available | Positive | 2827522 - 2829102 | 55469.3 |
| duf5629 family protein | CD58_RS12325 | Not Available | Positive | 2829339 - 2829635 | 11000.5 |
| lactonase family protein | CD58_RS12330 | Not Available | Positive | 2829622 - 2830797 | 42357.4 |
| hypothetical protein | CD58_RS12335 | Not Available | Positive | 2830954 - 2831133 | 6445.54 |
| hypothetical protein | CD58_RS31605 | Not Available | Positive | 2831309 - 2831434 | 4508.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
