Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenic transporter | CD58_RS12245 | Not Available | Positive | 2803514 - 2804797 | 45215.6 |
| duf1853 family protein | CD58_RS12250 | Not Available | Negative | 2804938 - 2805903 | 36743.9 |
| nad(+) kinase | CD58_RS12255 | Not Available | Positive | 2806091 - 2806981 | 32258.2 |
| metallophosphoesterase | CD58_RS12260 | Not Available | Positive | 2806978 - 2807952 | 37055.4 |
| rhomboid family intramembrane serine protease | CD58_RS12265 | Not Available | Positive | 2807949 - 2808821 | 31915.5 |
| yeac family protein | CD58_RS12270 | Not Available | Positive | 2808867 - 2809127 | 9797.63 |
| duf2797 domain-containing protein | CD58_RS12275 | Not Available | Positive | 2809124 - 2809954 | 30653.0 |
| aminopeptidase n | CD58_RS12280 | Not Available | Positive | 2809968 - 2812625 | 98962.2 |
| wd40/yvtn/bnr-like repeat-containing protein | CD58_RS12285 | Not Available | Positive | 2813013 - 2814065 | 36857.4 |
| efflux rnd transporter permease subunit | CD58_RS12290 | Not Available | Positive | 2814109 - 2816484 | 87070.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
