Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | CD58_RS12205 | Not Available | Positive | 2792553 - 2793005 | 16878.1 |
| dna polymerase iii subunit epsilon | CD58_RS12210 | Not Available | Positive | 2793238 - 2794002 | 27584.5 |
| gnat family n-acetyltransferase | CD58_RS12215 | Not Available | Positive | 2794303 - 2794917 | 22882.2 |
| lysr family transcriptional regulator | CD58_RS12220 | Not Available | Negative | 2794883 - 2795776 | 32509.7 |
| hypothetical protein | CD58_RS29240 | Not Available | Negative | 2795863 - 2796126 | 9541.16 |
| nadph-dependent fmn reductase | CD58_RS12225 | Not Available | Positive | 2796311 - 2796868 | 19707.6 |
| ynce family protein | CD58_RS28770 | Not Available | Positive | 2797046 - 2801242 | 149410.0 |
| hypothetical protein | CD58_RS30365 | Not Available | Negative | 2801746 - 2802000 | 9506.12 |
| duf6124 family protein | CD58_RS12235 | Not Available | Positive | 2802555 - 2802884 | 11725.8 |
| metalloregulator arsr/smtb family transcription factor | CD58_RS12240 | Not Available | Positive | 2803126 - 2803476 | 13035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
