Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS12155 | Not Available | Positive | 2780369 - 2780785 | 14808.7 |
| enoyl-acp reductase fabi | CD58_RS12160 | Not Available | Negative | 2780839 - 2781633 | 27982.5 |
| abc transporter atp-binding protein | CD58_RS12165 | Not Available | Negative | 2781653 - 2783263 | 59349.8 |
| abc transporter permease | CD58_RS12170 | Not Available | Negative | 2783265 - 2784284 | 37867.7 |
| microcin c abc transporter permease yejb | CD58_RS12175 | Not Available | Negative | 2784286 - 2785359 | 39435.7 |
| extracellular solute-binding protein | CD58_RS12180 | Not Available | Negative | 2785364 - 2787220 | 70366.9 |
| extracellular solute-binding protein | CD58_RS12185 | Not Available | Negative | 2787217 - 2789046 | 69645.3 |
| transglycosylase slt domain-containing protein | CD58_RS12190 | Not Available | Negative | 2789325 - 2790773 | 54132.7 |
| hydroxyacylglutathione hydrolase | CD58_RS12195 | Not Available | Negative | 2790873 - 2791640 | 27898.0 |
| class i sam-dependent methyltransferase | CD58_RS12200 | Not Available | Positive | 2791706 - 2792464 | 28088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
