Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02435 | CD58_RS12105 | Not Available | Positive | 2770073 - 2770678 | Not Available |
| gfa family protein | CD58_RS12110 | Not Available | Negative | 2770821 - 2771309 | 18078.6 |
| dna-3-methyladenine glycosylase family protein | CD58_RS12115 | Not Available | Negative | 2771509 - 2772123 | 22932.8 |
| bifunctional transcriptional activator/dna repair enzyme adaa | CD58_RS12120 | Not Available | Negative | 2772147 - 2773229 | 39551.9 |
| hypothetical protein | CD58_RS31125 | Not Available | Positive | 2773376 - 2773834 | 14496.9 |
| trkh family potassium uptake protein | CD58_RS12130 | Not Available | Negative | 2773904 - 2775358 | 52647.3 |
| lyse family translocator | CD58_RS12135 | Not Available | Positive | 2775559 - 2776146 | 21042.4 |
| helix-turn-helix transcriptional regulator | CD58_RS12140 | Not Available | Negative | 2776316 - 2777140 | 31269.8 |
| sensor domain-containing diguanylate cyclase | CD58_RS12145 | Not Available | Positive | 2777278 - 2778240 | 36159.2 |
| lipid ii-degrading bacteriocin | CD58_RS12150 | Not Available | Positive | 2779538 - 2780362 | 29954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
