Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dotu family type iv/vi secretion system protein | CD58_RS12055 | Not Available | Positive | 2753925 - 2754686 | 28198.8 |
| type vi secretion system protein | CD58_RS12060 | Not Available | Positive | 2754683 - 2758507 | 143237.0 |
| type vi secretion system protein tssa | CD58_RS12065 | Not Available | Positive | 2758504 - 2759586 | 40675.5 |
| 2-hydroxyacid dehydrogenase | CD58_RS12070 | Not Available | Negative | 2759583 - 2760536 | 33620.7 |
| hypothetical protein | CD58_RS12075 | Not Available | Negative | 2760849 - 2761742 | 31717.6 |
| lipocalin-like domain-containing protein | CD58_RS12080 | Not Available | Positive | 2762165 - 2762665 | 18411.8 |
| serine/threonine transporter | CD58_RS12085 | Not Available | Positive | 2762876 - 2764156 | 46187.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | CD58_RS12090 | Not Available | Negative | 2765357 - 2767966 | 93976.0 |
| duf1289 domain-containing protein | CD58_RS12095 | Not Available | Positive | 2768375 - 2768845 | 18359.3 |
| universal stress protein | CD58_RS12100 | Not Available | Negative | 2769031 - 2769894 | 31385.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
