Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | CD58_RS00765 | Not Available | Positive | 161536 - 162891 | 48584.0 |
| sorbitol dehydrogenase | CD58_RS00770 | Not Available | Positive | 162888 - 163397 | 18358.7 |
| gmc oxidoreductase | CD58_RS00775 | Not Available | Positive | 163394 - 165616 | 79514.1 |
| duf962 domain-containing protein | CD58_RS00780 | Not Available | Negative | 165746 - 166270 | 18906.5 |
| crp/fnr family transcriptional regulator | CD58_RS00785 | Not Available | Positive | 166358 - 167044 | 25618.7 |
| helix-turn-helix domain-containing protein | CD58_RS00790 | Not Available | Positive | 167155 - 167403 | 9153.17 |
| type ii toxin-antitoxin system hipa family toxin | CD58_RS00795 | Not Available | Positive | 167396 - 168634 | 45232.0 |
| arac family transcriptional regulator | CD58_RS00800 | Not Available | Negative | 168704 - 169708 | 37531.4 |
| fatty acid desaturase | CD58_RS00805 | Not Available | Positive | 169809 - 170882 | 40528.6 |
| tonb-dependent siderophore receptor | CD58_RS00810 | Not Available | Negative | 171023 - 173527 | 91669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
