Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2789 family protein | CD58_RS11900 | Not Available | Negative | 2722942 - 2723178 | 8757.23 |
| hypothetical protein | CD58_RS11905 | Not Available | Negative | 2723266 - 2723496 | 8481.08 |
| hypothetical protein | CD58_RS11910 | Not Available | Positive | 2724293 - 2724742 | 16536.0 |
| abc transporter substrate-binding protein | CD58_RS11915 | Not Available | Positive | 2724915 - 2725925 | 36938.1 |
| duf3995 domain-containing protein | CD58_RS11920 | Not Available | Positive | 2726065 - 2726502 | 15594.8 |
| na+/h+ antiporter subunit g | CD58_RS11925 | Not Available | Negative | 2726700 - 2727062 | 12942.2 |
| k+/h+ antiporter subunit f | CD58_RS11930 | Not Available | Negative | 2727059 - 2727337 | 10197.1 |
| na+/h+ antiporter subunit e | CD58_RS11935 | Not Available | Negative | 2727334 - 2727822 | 18394.2 |
| monovalent cation/h+ antiporter subunit d | CD58_RS11940 | Not Available | Negative | 2727819 - 2729504 | 59541.4 |
| na+/h+ antiporter subunit c | CD58_RS11945 | Not Available | Negative | 2729501 - 2729845 | 12311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
