Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tim barrel protein | CD58_RS11855 | Not Available | Positive | 2711098 - 2711919 | 30217.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | CD58_RS11860 | Not Available | Positive | 2712086 - 2714017 | 69954.5 |
| gfo/idh/moca family protein | CD58_RS11865 | Not Available | Positive | 2714047 - 2715057 | 36379.9 |
| gfo/idh/moca family oxidoreductase | CD58_RS11870 | Not Available | Positive | 2715232 - 2716284 | 38049.1 |
| hypothetical protein | CD58_RS31210 | Not Available | Positive | 2716427 - 2716579 | 5577.18 |
| sugar abc transporter substrate-binding protein | CD58_RS11875 | Not Available | Positive | 2716631 - 2717557 | 33275.2 |
| sugar abc transporter atp-binding protein | CD58_RS11880 | Not Available | Positive | 2717637 - 2719190 | 56194.7 |
| abc transporter permease | CD58_RS11885 | Not Available | Positive | 2719225 - 2720247 | 35540.7 |
| trar/dksa family transcriptional regulator | CD58_RS11890 | Not Available | Positive | 2720575 - 2720979 | 15473.2 |
| methyl-accepting chemotaxis protein | CD58_RS11895 | Not Available | Positive | 2721160 - 2722767 | 58105.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
